Out-of-distribution detection for computational pathology with multi-head ensembles

J. Winkens

University of Amsterdam
2019

Abstract

Distribution shift is a common phenomenon in real-life safety-critical situations that is detrimental to the performance of current deep learning models. Constructing a principled method to detect such a shift is critical to building safe and predictable automated image analysis pipelines for medical imaging. In this work, we interpret the problem of out-of-distribution detection for computational pathology in an epistemic uncertainty estimation setting. Given the difficulty of obtaining a sufficiently multi-modal predictive distribution for uncertainty estimation, we present a multiple heads topology in CNNs as a highly diverse ensembling method. We empirically prove that the method exhibits greater representational diversity than various popular ensembling methods, such as MC dropout and Deep Ensembles. The fast gradient sign method is repurposed and we show that it separates the softmax scores of in-distribution samples and out-of-distribution samples. We identify the challenges for this task in the domain of computational pathology and extensively demonstrate the effectiveness of the proposed method on two clinically relevant tasks in this field.

A pdf file of this publication is available for personal use. Enter your e-mail address in the box below and press the button. You will receive an e-mail message with a link to the pdf file.