Publications
2014
Papers in international journals
- C. Gatta and F. Ciompi, "Stacked sequential scale-space Taylor context", IEEE Transactions on Pattern Analysis and Machine Intelligence, 2014;36(8):1694-1700.
- G. Litjens, H. Huisman, R. Elliott, N. Shih, M. Feldman, S. Viswanath, J. Fütterer, J. Bomers and A. Madabhushi, "Quantitative identification of magnetic resonance imaging features of prostate cancer response following laser ablation and radical prostatectomy", Journal of Medical Imaging, 2014;1(3):035001-035001.
- C. Schaefer-Prokop, "[HRCT patterns of the most important interstitial lung diseases]", Radiologe, 2014;54(12):1170-1179.
- G. Karemore, M. Nielsen, N. Karssemeijer and S. Brandt, "A method to determine the mammographic regions that show early changes due to the development of breast cancer", Physics in Medicine and Biology, 2014;59(22):6759-6773.
- N. Saksens, E. Kersten, J. Groenewoud, M. van Grinsven, J. van de Ven, C. Sánchez, T. Schick, S. Fauser, A. den Hollander, C. Hoyng and C. Boon, "Clinical characteristics of familial and sporadic age-related macular degeneration: differences and similarities", Investigative Ophthalmology and Visual Science, 2014;55:7085-7092.
- N. Horeweg, J. van Rosmalen, M. Heuvelmans, C. van der Aalst, R. Vliegenthart, E. Scholten, K. ten Haaf, K. Nackaerts, J. Lammers, C. Weenink and others, "Lung cancer probability in patients with CT-detected pulmonary nodules: a prespecified analysis of data from the NELSON trial of low-dose CT screening", Lancet Oncology, 2014;15(12):1332-1341.
- N. Horeweg, E. Scholten, P. de Jong, C. van der Aalst, C. Weenink, J. Lammers, K. Nackaerts, R. Vliegenthart, K. Ten Haaf, U. Yousaf-Khan, M. Heuvelmans, E. Thunnissen, M. Oudkerk, W. Mali and H. de Koning, "Detection of lung cancer through low-dose CT screening (NELSON): a prespecified analysis of screening test performance and interval cancers", Lancet Oncology, 2014;15(12):1342-1350.
- S. Schalekamp, B. van Ginneken, I. van den Berk, I. Hartmann, M. Snoeren, A. Odink, W. van Lankeren, S. Pegge, L. Schijf, N. Karssemeijer and C. Schaefer-Prokop, "Bone suppression increases the visibility of invasive pulmonary aspergillosis in chest radiographs", PLoS One, 2014;9(10):e108551.
- M. Breuninger, B. van Ginneken, R. Philipsen, F. Mhimbira, J. Hella, F. Lwilla, J. van den Hombergh, A. Ross, L. Jugheli, D. Wagner and K. Reither, "Diagnostic accuracy of computer-aided detection of pulmonary tuberculosis in chest radiographs: a validation study from sub-saharan Africa", PLoS One, 2014;9(9):e106381.
- R. Rudyanto, S. Kerkstra, E. van Rikxoort, C. Fetita, P. Brillet, C. Lefevre, W. Xue, X. Zhu, J. Liang, I. Öksüz, D. Ünay, K. Kadipasaoglu, R. Estépar, J. Ross, G. Washko, J. Prieto, M. Hoyos, M. Orkisz, H. Meine, M. Hüllebrand, C. Stöcker, F. Mir, V. Naranjo, E. Villanueva, M. Staring, C. Xiao, B. Stoel, A. Fabijanska, E. Smistad, A. Elster, F. Lindseth, A. Foruzan, R. Kiros, K. Popuri, D. Cobzas, D. Jimenez-Carretero, A. Santos, M. Ledesma-Carbayo, M. Helmberger, M. Urschler, M. Pienn, D. Bosboom, A. Campo, M. Prokop, P. de Jong, C. Ortiz-de-Solorzano, A. Muñoz-Barrutia and B. van Ginneken, "Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: The VESSEL12 study", Medical Image Analysis, 2014;18:1217-1232.
- F. Mohamed Hoesein, P. de Jong, J. Lammers, W. Mali, O. Mets, M. Schmidt, H. de Koning, C. van der Aalst, M. Oudkerk, R. Vliegenthart, B. van Ginneken, E. van Rikxoort and P. Zanen, "Contribution of CT Quantified Emphysema, Air Trapping and Airway Wall Thickness on Pulmonary Function in Male Smokers With and Without COPD", COPD, 2014;11(5):503-509.
- T. Kockelkorn, C. Schaefer-Prokop, G. Bozovic, A. Muñoz-Barrutia, E. van Rikxoort, M. Brown, P. de Jong, M. Viergever and B. van Ginneken, "Interactive lung segmentation in abnormal human and animal chest CT scans", Medical Physics, 2014;41(8):081915.
- J. Melendez, C. Sánchez, B. van Ginneken and N. Karssemeijer, "Improving mass candidate detection in mammograms via feature maxima propagation and local feature selection", Medical Physics, 2014;41(8):081904.
- P. Maduskar, L. Hogeweg, P. de Jong, L. Peters-Bax, R. Dawson, H. Ayles, C. Sánchez and B. van Ginneken, "Cavity contour segmentation in chest radiographs using supervised learning and dynamic programming", Medical Physics, 2014;41(7):071912-1 - 071912-15.
- R. van den Boom, R. Manniesing, M. Oei, W. van der Woude, E. Smit, H. Laue, B. van Ginneken and M. Prokop, "A 4D Digital Phantom for Patient-Specific Simulation of Brain CT Perfusion Protocols", Medical Physics, 2014;41:071907-1 - 071907-9.
- G. Deslee, K. Klooster, M. Hetzel, F. Stanzel, R. Kessler, C. Marquette, C. Witt, S. Blaas, W. Gesierich, F. Herth, J. Hetzel, E. van Rikxoort and D. Slebos, "Lung volume reduction coil treatment for patients with severe emphysema: a European multicentre trial", Thorax, 2014;69(11):980-986.
- C. Schaefer-Prokop, H. Prosch and M. Prokop, "[Lung cancer screening. What have we learnt for the practice so far?]", Radiologe, 2014;54(5):462-469.
- G. Litjens, O. Debats, J. Barentsz, N. Karssemeijer and H. Huisman, "Computer-aided detection of prostate cancer in MRI", IEEE Transactions on Medical Imaging, 2014;33(5):1083-1092.
- S. Dettmer, L. Peters, C. de Wall, C. Schaefer-Prokop, M. Schmidt, G. Warnecke, J. Gottlieb, F. Wacker and H. Shin, "Bronchial wall measurements in patients after lung transplantation: evaluation of the diagnostic value for the diagnosis of bronchiolitis obliterans syndrome", PLoS One, 2014;9(4):e93783.
- O. Gishti, R. Gaillard, R. Manniesing, M. Abrahamse-Berkeveld, E. van der Beek, D. Heppe, E. Steegers, A. Hofman, L. Duijts, B. Durmus and V. Jaddoe, "Fetal and infant growth patterns associated with total and abdominal fat distribution in school-age children", Journal of Clinical Endocrinology and Metabolism, 2014;99(7):2557-2566.
- M. Muyoyeta, P. Maduskar, M. Moyo, N. Kasese, D. Milimo, R. Spooner, N. Kapata, L. Hogeweg, B. van Ginneken and H. Ayles, "The Sensitivity and Specificity of Using a Computer Aided Diagnosis Program for Automatically Scoring Chest X-Rays of Presumptive TB Patients Compared with Xpert MTB/RIF in Lusaka Zambia", PLoS One, 2014;9(4):e93757.
- R. Mann, R. Mus, J. van Zelst, C. Geppert, N. Karssemeijer and B. Platel, "A Novel Approach to Contrast-Enhanced Breast Magnetic Resonance Imaging for Screening: High-Resolution Ultrafast Dynamic Imaging", Investigative Radiology, 2014;49(9):579-585.
- S. Schalekamp, B. van Ginneken, E. Koedam, M. Snoeren, A. Tiehuis, R. Wittenberg, N. Karssemeijer and C. Schaefer-Prokop, "Computer aided detection improves detection of pulmonary nodules in chest radiographs beyond the support by bone suppressed images", Radiology, 2014;272(1):252-261.
- S. Schalekamp, B. van Ginneken, E. Koedam, M. Snoeren, A. Tiehuis, R. Wittenberg, N. Karssemeijer and C. Schaefer-Prokop, "Computer-aided detection improves detection of pulmonary nodules in chest radiographs beyond the support by bone-suppressed images", Radiology, 2014;272(1):252-261.
- S. Schalekamp, B. van Ginneken, B. Heggelman, M. Imhof-Tas, I. Somers, M. Brink, M. Spee, C. Schaefer-Prokop and N. Karssemeijer, "New methods for using computer-aided detection information for the detection of lung nodules on chest radiographs", British Journal of Radiology, 2014;87(1036):20140015.
- B. Durmus, D. Heppe, O. Gishti, R. Manniesing, M. Abrahamse-Berkeveld, E. van der Beek, A. Hofman, L. Duijts, R. Gaillard and V. Jaddoe, "General and abdominal fat outcomes in school-age children associated with infant breastfeeding patterns", American Journal of Clinical Nutrition, 2014;12(6):1351-1358.
- S. Muenzing, B. van Ginneken, M. Viergever and J. Pluim, "DIRBoost-An algorithm for boosting deformable image registration: Application to lung CT intra-subject registration", Medical Image Analysis, 2014;18(3):449-459.
- J. Bozek, M. Kallenberg, M. Grgic and N. Karssemeijer, "Use of volumetric features for temporal comparison of mass lesions in full field digital mammograms", Medical Physics, 2014;41(2):021902.
- S. Schalekamp, B. van Ginneken, N. Karssemeijer and C. Schaefer-Prokop, "Chest radiography: new technological developments and their applications", Seminars in Respiratory and Critical Care Medicine, 2014;35(1):3-16.
- A. Gubern-Mérida, M. Kallenberg, B. Platel, R. Mann, R. Marti and N. Karssemeijer, "Volumetric breast density estimation from Full-Field Digital Mammograms: A validation study", PLoS One, 2014;9(1):e85952.
- B. Durmus, D. Heppe, H. Taal, R. Manniesing, H. Raat, A. Hofman, E. Steegers, R. Gaillard and V. Jaddoe, "Parental Smoking During Pregnancy and Total and Abdominal Fat Distribution in School-age Children: the Generation R Study", International Journal of Obesity, 2014;38(7):966-972.
- C. Jacobs, E. van Rikxoort, T. Twellmann, E. Scholten, P. de Jong, J. Kuhnigk, M. Oudkerk, H. de Koning, M. Prokop, C. Schaefer-Prokop and B. van Ginneken, "Automatic Detection of Subsolid Pulmonary Nodules in Thoracic Computed Tomography Images", Medical Image Analysis, 2014;18:374-384.
- G. Litjens, R. Toth, W. van de Ven, C. Hoeks, S. Kerkstra, B. van Ginneken, G. Vincent, G. Guillard, N. Birbeck, J. Zhang, R. Strand, F. Malmberg, Y. Ou, C. Davatzikos, M. Kirschner, F. Jung, J. Yuan, W. Qiu, Q. Gao, P. Edwards, B. Maan, F. van der Heijden, S. Ghose, J. Mitra, J. Dowling, D. Barratt, H. Huisman and A. Madabhushi, "Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge", Medical Image Analysis, 2014;18(2):359-373.
- B. Platel, R. Mus, T. Welte, N. Karssemeijer and R. Mann, "Automated Characterization of Breast Lesions Imaged with an Ultrafast DCE-MR Protocol", IEEE Transactions on Medical Imaging, 2014:225-232.
- F. Mohamed Hoesein, M. Schmidt, O. Mets, H. Gietema, J. Lammers, P. Zanen, H. de Koning, C. van der Aalst, M. Oudkerk, R. Vliegenthart, I. Išgum, M. Prokop, B. van Ginneken, E. van Rikxoort and P. de Jong, "Discriminating dominant computed tomography phenotypes in smokers without or with mild COPD", Respiratory Medicine, 2014;108:136-143.
- S. Balocco, C. Gatta, F. Ciompi, A. Wahle, P. Radeva, S. Carlier, G. Unal, E. Sanidas, J. Mauri, X. Carillo, T. Kovarnik, C. Wang, H. Chen, T. Exarchos, D. Fotiadis, F. Destrempes, G. Cloutier, O. Pujol, M. Alberti, E. Mendizabal-Ruiz, M. Rivera, T. Aksoy, R. Downe and I. Kakadiaris, "Standardized evaluation methodology and reference database for evaluating IVUS image segmentation", Computerized Medical Imaging and Graphics, 2014;38:70-90.
- P. Ciet, P. Wielopolski, R. Manniesing, S. Lever, M. De Bruijne, G. Morana, P. Muzzio, M. Lequin and H. Tiddens, "Spirometer-controlled Cine-Magnetic Resonance Imaging for Diagnosis of Tracheobronchomalacia in Pediatric Patients", European Respiratory Journal, 2014;43(1):115-124.
- F. Ciompi, O. Pujol and P. Radeva, "ECOC-DRF: Discriminative Random Fields based on Error-Correcting Output Codes", Pattern Recognition, 2014;47:2193-2204.
- H. Liu, T. Tan, J. van Zelst, R. Mann, N. Karssemeijer and B. Platel, "Incorporating texture features in a computer-aided breast lesion diagnosis system for automated three-dimensional breast ultrasound", Journal of Medical Imaging, 2014;1(2):024501-024501.
- S. Schalekamp, B. van Ginneken, C. Schaefer-Prokop and N. Karssemeijer, "Influence of study design in receiver operating characteristics studies: sequential versus independent reading", Journal of Medical Imaging, 2014;1(1):015501-015501.
- A. Poncela and L. Gallardo-Estrella, "Command-based voice teleoperation of a mobile robot via a human-robot interface", Robotica, 2014:1-18.
- S. van der Wal, M. Vaneker, M. Steegers, V. B, M. Kox, J. van der Laak, J. van der Hoeven, K. Vissers and G. Scheffer, "Lidocaine increases the anti-inflammatory cytokine IL-10 following mechanical ventilation in healthy mice", Acta Anaesthesiologica Scandinavica, 2014;59:47-55.
- L. Louzao Martinez, E. Friedlander, J. van der Laak and K. Hebeda, "Abundance of IgG4+ Plasma Cells in Isolated Reactive Lymphadenopathy Is No Indication of IgG4-Related Disease", American Journal of Clinical Pathology, 2014;142(4):459-466.
Papers in conference proceedings
- G. Litjens, H. Huisman, R. Elliott, N. Shih, M. Feldman, Fütterer, J. Bomers and A. Madabhushi, "Distinguishing benign confounding treatment changes from residual prostate cancer on MRI following laser ablation", Medical Imaging, 2014;9036:90361D.
- C. Jacobs, S. Opdam, E. van Rikxoort, O. Mets, J. Rooyackers, P. de Jong, M. Prokop and B. van Ginneken, "Automated detection and quantification of micronodules in thoracic CT scans to identify subjects at risk for silicosis", Medical Imaging, 2014;9035:90351I.
- J. Mordang, J. Hauth, G. den Heeten and N. Karssemeijer, "Automated Labeling of Screening Mammograms with Arterial Calcifications", Breast Imaging, 2014;8539.
- J. Melendez, C. Sánchez, R. Philipsen, P. Maduskar and B. van Ginneken, "Multiple-instance learning for computer-aided detection of tuberculosis", Medical Imaging, 2014;9035:90351J.
- S. Rabbani, P. Maduskar, R. Philipsen, L. Hogeweg and B. van Ginneken, "Effect of image variation on computer aided detection systems", Medical Imaging, 2014;9035:90352H-1-90352H-8.
- Y. Diez, A. Gubern-Mérida, L. Wang, S. Diekmann, J. Martí, B. Platel, J. Kramme and R. Martí, "Comparison of Methods for Current-to-Prior Registration of Breast DCE-MRI", IWDM '14: Proceedings of the 12th international workshop on Digital Mammography, 2014;8539:689-695.
- G. Litjens, R. Elliott, N. Shih, M. Feldman, J. Barentsz, C. - van de Hulsbergen Kaa, I. Kovacs, H. Huisman and A. Madabhushi, "Distinguishing prostate cancer from benign confounders via a cascaded classifier on multi-parametric MRI", Medical Imaging, 2014;9035:903512.
- Q. Mahmood, A. Chodorowski, B. Ehteshami Bejnordi and M. Persson, "A fully automatic unsupervised segmentation framework for the brain tissues in MR images", Medical Imaging, 2014.
- K. Holland, M. Kallenberg, R. Mann, C. van Gils and N. Karssemeijer, "Stability of Volumetric Tissue Composition Measured in Serial Screening Mammograms", Breast Imaging -12th International Workshop, IWDM 2014, Gifu City, Japan, June 29 AC/a,!aEURoe July 2, 2014. Proceedings, 2014;8539.
- B. Ehteshami Bejnordi, N. Timofeeva, I. Otte-Höller, N. Karssemeijer and J. van der Laak, "Quantitative analysis of stain variability in histology slides and an algorithm for standardization", Medical Imaging, 2014.
Abstracts
- B. Lassen, J. Kuhnigk, C. Jacobs, E. van Rikxoort and B. van Ginneken, "Fully Automatic Volumetric Segmentation of Pulmonary Nodules: Evaluation using the Complete LIDC/IDRI Database", Annual Meeting of the Radiological Society of North America, 2014.
- F. Ciompi, B. de Hoop, C. Jacobs, M. Prokop, P. a de Jong and B. van Ginneken, "Automatic Classification of Perifissural Pulmonary Nodules in Thoracic CT Images", Annual Meeting of the Radiological Society of North America, 2014.
- S. Schalekamp, N. Karssemeijer, C. Schaefer-Prokop and B. van Ginneken, "Double reading improves detection of small lung tumors in chest radiographs: can a computer aided detection system replace the second reader?", European Congress of Radiology, 2014.
- S. Schalekamp, I. van den Berk, I. Hartmann, M. Snoeren, A. Odink, S. Pegge, L. Schijf, N. Karssemeijer and C. Schaefer-Prokop, "Bone suppressed images improve pulmonary fungal infection detection in chest radiographs", European Congress of Radiology, 2014.
- A. Steiner, F. Mhimbira, J. van den Hombergh, P. Clowes, C. Mangu, B. van Ginneken, M. Hoelscher and K. Reither, "Computer-aided diagnosis of X-rays in a screening for pulmonary tuberculosis of a prison population in Tanzania", 45th World Conference on Lung Health, 2014.
- A. Zaidi, N. Khalid, R. Philipsen, B. van Ginneken, S. Khowaja and A. Khan, "Symptomatic screening and computer-aided radiography for active-case finding of tuberculosis: a prediction model for TB case detection", 45th World Conference on Lung Health, 2014.
- M. van Grinsven, G. Buitendijk, C. Brussee, B. van Ginneken, T. Theelen, C. Klaver and C. Sánchez, "Automatic detection of reticular drusen using multimodal retinal image analysis", Association for Research in Vision and Ophthalmology, 2014.
- M. Schmidt, E. Rikxoort, J. Kuhnigk, P. Judy and B. van Ginneken, "Subvoxel Accurate Airway Wall Measurements using an Intensity Integration Approach: Comparative Study using the COPDGene Phantom", Annual Meeting of the Radiological Society of North America, 2014.
- R. Philipsen, P. Maduskar, L. Hogeweg, J. Melendez, C. Sánchez and B. van Ginneken, "Robust Computer-Aided Detection of Tuberculosis in Chest Radiographs Using Energy Normalization", Annual Meeting of the Radiological Society of North America, 2014.
- E. Vos, T. Kobus, G. Litjens, T. Hambrock, C. - van de Kaa, M. Maas and T. Scheenen, "Multiparametric MR imaging for the assessment of prostate cancer aggressiveness at 3 Tesla", Annual Meeting of the International Society for Magnetic Resonance in Medicine, 2014.
- A. Khan, A. Zaidi, R. Philipsen, S. Khowaja, B. van Ginneken, A. Khan and T. Dossul, "Detection of Chest X-ray abnormalities and tuberculosis using computer-aided detection vs interpretation by radiologists and a clinical officer", 45th World Conference on Lung Health, 2014.
- W. van de Ven, S. Rinsma, N. Karssemeijer, J. Barentsz and H. Huisman, "Electro-magnetic tracker-based fusion for image-guided TRUS prostate biopsy", European Congress of Radiology, 2014.
- L. Gallardo-Estrella, E. Pompe, F. Mohamed Hoesein, P. De Jong, B. van Ginneken, E. van Rikxoort, H. de Koning, M. Oudkerk and J. Lammers, "Relationship between Lung Function Parameters and CT Measurements of Emphysema, Airways, and Tracheal Collapse in Subjects with Mild COPD", Annual Meeting of the Radiological Society of North America, 2014.
- G. Litjens, N. Karssemeijer, J. Barentsz and H. Huisman, "Computer-aided Detection of Prostate Cancer in Multi-parametric Magnetic Resonance Imaging", Annual Meeting of the Radiological Society of North America, 2014.
- M. Oei, R. Manniesing, W. and van denRieneke Boom, B. van Ginneken, F. Meijer and M. Prokop, "One-Step-Stroke CT Imaging - Part I: Optimization of Interleaved Acquisition of Cerebral CT Perfusion and Neck CT Angiography", Annual Meeting of the Radiological Society of North America, 2014.
- M. Oei, R. Manniesing, F. Meijer and M. Prokop, "One-Step-Stroke Imaging: Does an Interleaved Acquisition of Cerebral CT Perfusion and CTA of the Carotids Affect CTP Values", European Congress of Radiology, 2014.
- A. Setio, J. Gelderblom, C. Jacobs and B. van Ginneken, "Automatic Detection of Large Pulmonary Nodules in Thoracic CT Images", Annual Meeting of the Radiological Society of North America, 2014.
- B. van Ginneken, C. Jacobs, E. Scholten, M. Prokop and P. de Jong, "Feasibility of Rapid Reading of CT Lung Cancer Screening with Computer-Aided Detection Support", Annual Meeting of the Radiological Society of North America, 2014.
PhD theses
- G. van Schie, "Image Computing Methods for Accurate and Efficient Interpretation of Digital Breast Tomosynthesis", PhD thesis, 2014.
- E. Scholten, "SubSolid Nodules in lung cancer screening", PhD thesis, 2014.
- S. Muenzing, "Learning-based approaches to deformable image registration", PhD thesis, 2014.
- T. Tan, "Automated 3D Breast Ultrasound Image Analysis", PhD thesis, 2014.